Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Smim1P0C8K7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm7357-201ENSMUST00000195361 2991 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm18711-201ENSMUST00000199341 750 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm44711-201ENSMUST00000205414 1264 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 AC159896.2-201ENSMUST00000214753 269 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 AC134254.1-201ENSMUST00000221362 167 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gm6170-201ENSMUST00000187672 1388 ntBASIC7.95□□□□□ -1.14
Smim1P0C8K7 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Smim1P0C8K7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Gm21817-201ENSMUST00000178584 2583 ntBASIC7.94□□□□□ -1.14
Smim1P0C8K7 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Smim1P0C8K7 Mir449b-201ENSMUST00000104833 80 ntBASIC7.94□□□□□ -1.14
Smim1P0C8K7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms