Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gm6867-201ENSMUST00000219165 425 ntBASIC10.19□□□□□ -0.78
PtcraP0C6B2 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.19□□□□□ -0.78
PtcraP0C6B2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.19□□□□□ -0.78
PtcraP0C6B2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.19□□□□□ -0.78
PtcraP0C6B2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
PtcraP0C6B2 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm7857-201ENSMUST00000117957 358 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm11941-201ENSMUST00000119904 610 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm23958-201ENSMUST00000157207 105 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm43966-201ENSMUST00000203301 612 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm10288-201ENSMUST00000084614 537 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Mir433-201ENSMUST00000093564 124 ntBASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
PtcraP0C6B2 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.17□□□□□ -0.78
PtcraP0C6B2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.17□□□□□ -0.78
PtcraP0C6B2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
PtcraP0C6B2 Gm13035-201ENSMUST00000117496 342 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms