Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hoxc9P09633 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.03■□□□□ -0
Hoxc9P09633 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.03■□□□□ -0
Hoxc9P09633 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.03■□□□□ -0
Hoxc9P09633 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.03■□□□□ -0
Hoxc9P09633 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC15.03■□□□□ -0
Hoxc9P09633 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Gm5342-201ENSMUST00000181982 1003 ntBASIC15.03■□□□□ -0
Hoxc9P09633 Gm5621-201ENSMUST00000187303 640 ntBASIC15.03■□□□□ -0
Hoxc9P09633 Gm5700-201ENSMUST00000191483 989 ntBASIC15.03■□□□□ -0
Hoxc9P09633 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Gm18204-201ENSMUST00000209835 793 ntBASIC15.03■□□□□ -0
Hoxc9P09633 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hoxc9P09633 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hoxc9P09633 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Ptprm-203ENSMUST00000224091 3773 ntBASIC15.03■□□□□ -0
Hoxc9P09633 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Hoxc9P09633 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Hoxc9P09633 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxc9P09633 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Hoxc9P09633 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Hoxc9P09633 Gm37122-201ENSMUST00000195313 1567 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Hoxc9P09633 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hoxc9P09633 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Hoxc9P09633 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.02■□□□□ -0
Hoxc9P09633 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gm28424-201ENSMUST00000187393 1319 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC15.02■□□□□ -0
Hoxc9P09633 Gm5257-201ENSMUST00000121823 790 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Gm4982-201ENSMUST00000160440 1098 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC15.02■□□□□ -0
Hoxc9P09633 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.02■□□□□ -0
Hoxc9P09633 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.02■□□□□ -0
Hoxc9P09633 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC15.02■□□□□ -0
Hoxc9P09633 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gm44647-201ENSMUST00000207402 428 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hoxc9P09633 Gm8181-201ENSMUST00000062242 669 ntBASIC15.02■□□□□ -0
Hoxc9P09633 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hoxc9P09633 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.02□□□□□ -0.01
Hoxc9P09633 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Hoxc9P09633 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC15.02□□□□□ -0.01
Hoxc9P09633 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxc9P09633 CT010447.1-201ENSMUST00000225657 1608 ntBASIC15.02□□□□□ -0.01
Hoxc9P09633 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.01□□□□□ -0.01
Hoxc9P09633 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc9P09633 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc9P09633 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC15.01□□□□□ -0.01
Hoxc9P09633 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc9P09633 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc9P09633 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC15.01□□□□□ -0.01
Hoxc9P09633 Mir1905-201ENSMUST00000122779 82 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms