Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.36□□□□□ -0.43
Hoxc8P09025 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hoxc8P09025 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.36□□□□□ -0.43
Hoxc8P09025 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm9133-201ENSMUST00000118289 540 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm12663-201ENSMUST00000118481 958 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm14234-201ENSMUST00000119539 845 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm25343-201ENSMUST00000157460 107 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm17214-201ENSMUST00000164501 541 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm43966-201ENSMUST00000203301 612 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.35□□□□□ -0.43
Hoxc8P09025 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.35□□□□□ -0.43
Hoxc8P09025 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Snord23-201ENSMUST00000116828 109 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm15617-201ENSMUST00000118973 771 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm14213-201ENSMUST00000119778 768 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc8P09025 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm44216-201ENSMUST00000203942 157 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm44647-201ENSMUST00000207402 428 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm18204-201ENSMUST00000209835 793 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm2594-201ENSMUST00000214774 742 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm26670-202ENSMUST00000226862 340 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.34□□□□□ -0.43
Hoxc8P09025 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Hoxc8P09025 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc8P09025 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms