Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Gm15197-201ENSMUST00000120526 478 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.78□□□□□ -0.2
Col3a1P08121 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.78□□□□□ -0.2
Col3a1P08121 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col3a1P08121 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.78□□□□□ -0.2
Col3a1P08121 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.78□□□□□ -0.2
Col3a1P08121 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.78□□□□□ -0.2
Col3a1P08121 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col3a1P08121 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.77□□□□□ -0.2
Col3a1P08121 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.77□□□□□ -0.2
Col3a1P08121 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.77□□□□□ -0.2
Col3a1P08121 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.77□□□□□ -0.2
Col3a1P08121 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Col3a1P08121 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.77□□□□□ -0.2
Col3a1P08121 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Col3a1P08121 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Col3a1P08121 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.77□□□□□ -0.2
Col3a1P08121 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Col3a1P08121 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.77□□□□□ -0.21
Col3a1P08121 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Gm7541-201ENSMUST00000118361 535 ntBASIC13.77□□□□□ -0.21
Col3a1P08121 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.77□□□□□ -0.21
Col3a1P08121 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.77□□□□□ -0.21
Col3a1P08121 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Gm18798-201ENSMUST00000187264 1700 ntBASIC13.77□□□□□ -0.21
Col3a1P08121 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.77□□□□□ -0.21
Col3a1P08121 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.77□□□□□ -0.21
Col3a1P08121 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.77□□□□□ -0.21
Col3a1P08121 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col3a1P08121 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col3a1P08121 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col3a1P08121 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.76□□□□□ -0.21
Col3a1P08121 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col3a1P08121 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.76□□□□□ -0.21
Col3a1P08121 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm9133-201ENSMUST00000118289 540 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Gm13022-201ENSMUST00000121181 285 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Col3a1P08121 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm22379-201ENSMUST00000157480 131 ntBASIC13.76□□□□□ -0.21
Col3a1P08121 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.76□□□□□ -0.21
Col3a1P08121 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col3a1P08121 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col3a1P08121 Id2-203ENSMUST00000222667 958 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms