Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm28662-201ENSMUST00000188446 695 ntBASIC10.41□□□□□ -0.74
P06344 Gm28251-201ENSMUST00000188835 695 ntBASIC10.41□□□□□ -0.74
P06344 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.41□□□□□ -0.74
P06344 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.41□□□□□ -0.74
P06344 Gm37318-201ENSMUST00000194325 695 ntBASIC10.41□□□□□ -0.74
P06344 Gm38017-201ENSMUST00000194768 695 ntBASIC10.41□□□□□ -0.74
P06344 Gm37287-201ENSMUST00000195449 695 ntBASIC10.41□□□□□ -0.74
P06344 Gm37793-201ENSMUST00000195548 695 ntBASIC10.41□□□□□ -0.74
P06344 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.41□□□□□ -0.74
P06344 Gm45113-201ENSMUST00000207518 165 ntBASIC10.41□□□□□ -0.74
P06344 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Gm45118-201ENSMUST00000208928 825 ntBASIC10.41□□□□□ -0.74
P06344 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.41□□□□□ -0.74
P06344 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.41□□□□□ -0.74
P06344 Gm7940-201ENSMUST00000218195 769 ntBASIC10.41□□□□□ -0.74
P06344 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.41□□□□□ -0.74
P06344 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
P06344 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.41□□□□□ -0.74
P06344 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
P06344 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
P06344 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
P06344 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
P06344 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
P06344 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.4□□□□□ -0.74
P06344 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
P06344 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.4□□□□□ -0.74
P06344 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
P06344 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
P06344 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
P06344 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.4□□□□□ -0.74
P06344 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
P06344 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.4□□□□□ -0.74
P06344 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.4□□□□□ -0.74
P06344 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.4□□□□□ -0.74
P06344 Mir6546-201ENSMUST00000184460 62 ntBASIC10.4□□□□□ -0.74
P06344 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.4□□□□□ -0.74
P06344 Gm29499-201ENSMUST00000189151 486 ntBASIC10.4□□□□□ -0.74
P06344 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Gm28329-201ENSMUST00000191208 689 ntBASIC10.4□□□□□ -0.74
P06344 Gm29171-201ENSMUST00000191397 486 ntBASIC10.4□□□□□ -0.74
P06344 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.4□□□□□ -0.74
P06344 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.4□□□□□ -0.74
P06344 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
P06344 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
P06344 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
P06344 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
P06344 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P06344 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.4□□□□□ -0.75
P06344 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.4□□□□□ -0.75
P06344 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
P06344 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
P06344 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
P06344 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P06344 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P06344 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.39□□□□□ -0.75
P06344 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P06344 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.39□□□□□ -0.75
P06344 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms