Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.45□□□□□ -0.9
P06323 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.45□□□□□ -0.9
P06323 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P06323 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.45□□□□□ -0.9
P06323 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.45□□□□□ -0.9
P06323 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
P06323 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
P06323 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
P06323 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
P06323 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Gm12015-201ENSMUST00000117065 843 ntBASIC9.44□□□□□ -0.9
P06323 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.44□□□□□ -0.9
P06323 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.44□□□□□ -0.9
P06323 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
P06323 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
P06323 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.44□□□□□ -0.9
P06323 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.44□□□□□ -0.9
P06323 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.44□□□□□ -0.9
P06323 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
P06323 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P06323 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P06323 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
P06323 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.43□□□□□ -0.9
P06323 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
P06323 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
P06323 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.43□□□□□ -0.9
P06323 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.43□□□□□ -0.9
P06323 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P06323 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P06323 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.43□□□□□ -0.9
P06323 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P06323 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
P06323 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms