Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Hcn1O88704 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Hcn1O88704 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.21□□□□□ -0.62
Hcn1O88704 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.21□□□□□ -0.62
Hcn1O88704 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Hcn1O88704 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Hcn1O88704 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.2□□□□□ -0.62
Hcn1O88704 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.2□□□□□ -0.62
Hcn1O88704 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm14277-201ENSMUST00000121195 360 ntBASIC11.2□□□□□ -0.62
Hcn1O88704 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm24749-201ENSMUST00000157838 343 ntBASIC11.2□□□□□ -0.62
Hcn1O88704 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm27341-201ENSMUST00000183570 106 ntBASIC11.2□□□□□ -0.62
Hcn1O88704 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 Gm43962-201ENSMUST00000203898 190 ntBASIC11.2□□□□□ -0.62
Hcn1O88704 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Hcn1O88704 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Hcn1O88704 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.19□□□□□ -0.62
Hcn1O88704 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Hcn1O88704 Gm14028-201ENSMUST00000117434 479 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Gm7722-201ENSMUST00000120646 741 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Gm27627-201ENSMUST00000183644 150 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Gm37666-201ENSMUST00000194110 866 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.19□□□□□ -0.62
Hcn1O88704 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.19□□□□□ -0.62
Hcn1O88704 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Hcn1O88704 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hcn1O88704 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.19□□□□□ -0.62
Hcn1O88704 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Hcn1O88704 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Hcn1O88704 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms