Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mir7051-201ENSMUST00000184167 73 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm28833-201ENSMUST00000189671 559 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm25053-202ENSMUST00000199731 132 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trdmt1O55055 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.84□□□□□ -0.35
Trdmt1O55055 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trdmt1O55055 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.83□□□□□ -0.35
Trdmt1O55055 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Trdmt1O55055 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trdmt1O55055 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.83□□□□□ -0.35
Trdmt1O55055 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.83□□□□□ -0.35
Trdmt1O55055 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trdmt1O55055 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trdmt1O55055 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm11560-201ENSMUST00000117567 948 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm15528-201ENSMUST00000117821 864 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm11700-201ENSMUST00000119409 403 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm22146-201ENSMUST00000157397 288 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm9081-201ENSMUST00000182346 991 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm18776-201ENSMUST00000188833 654 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Trdmt1O55055 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm6722-201ENSMUST00000221586 390 ntBASIC12.83□□□□□ -0.36
Trdmt1O55055 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trdmt1O55055 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trdmt1O55055 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm21778-201ENSMUST00000178779 471 ntBASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm26989-201ENSMUST00000182608 749 ntBASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm43671-201ENSMUST00000200422 433 ntBASIC12.82□□□□□ -0.36
Trdmt1O55055 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trdmt1O55055 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.82□□□□□ -0.36
Trdmt1O55055 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trdmt1O55055 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms