Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Gm13461-201ENSMUST00000120980 662 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Gm8199-201ENSMUST00000121323 823 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.41□□□□□ -0.58
Npc1O35604 Gm5714-201ENSMUST00000197343 566 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.41□□□□□ -0.58
Npc1O35604 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.41□□□□□ -0.58
Npc1O35604 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Npc1O35604 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Npc1O35604 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Npc1O35604 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.41□□□□□ -0.58
Npc1O35604 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Npc1O35604 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.4□□□□□ -0.58
Npc1O35604 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Gm12165-201ENSMUST00000117047 342 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Gm13408-201ENSMUST00000119822 798 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.4□□□□□ -0.58
Npc1O35604 Gm13935-201ENSMUST00000121859 798 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.4□□□□□ -0.58
Npc1O35604 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.4□□□□□ -0.58
Npc1O35604 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.4□□□□□ -0.58
Npc1O35604 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Gm38117-201ENSMUST00000194653 939 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.4□□□□□ -0.58
Npc1O35604 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.4□□□□□ -0.58
Npc1O35604 Gm6108-201ENSMUST00000208365 367 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Gm45575-201ENSMUST00000210283 548 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Gm8959-201ENSMUST00000213150 571 ntBASIC11.4□□□□□ -0.58
Npc1O35604 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.4□□□□□ -0.58
Npc1O35604 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.4□□□□□ -0.58
Npc1O35604 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npc1O35604 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.4□□□□□ -0.59
Npc1O35604 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.4□□□□□ -0.59
Npc1O35604 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.4□□□□□ -0.59
Npc1O35604 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.59
Npc1O35604 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Npc1O35604 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npc1O35604 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms