Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm42430-201ENSMUST00000197209 616 ntBASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Gm8255-201ENSMUST00000218693 305 ntBASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
B020004C17RikJ3QP07 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm12389-201ENSMUST00000117696 418 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm14497-201ENSMUST00000119537 580 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm15620-201ENSMUST00000122949 270 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Mir6941-201ENSMUST00000184711 59 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm5700-201ENSMUST00000191483 989 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Gm5870-201ENSMUST00000196461 282 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 BC106175-202ENSMUST00000219344 1213 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
B020004C17RikJ3QP07 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm6024-201ENSMUST00000117850 1558 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm18210-201ENSMUST00000209001 1524 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm13019-201ENSMUST00000120000 276 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm13284-201ENSMUST00000121020 547 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm14165-201ENSMUST00000121456 952 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm13981-201ENSMUST00000122360 447 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm16167-201ENSMUST00000160428 1065 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm18801-201ENSMUST00000186616 536 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Gm37644-201ENSMUST00000192190 2270 ntBASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
B020004C17RikJ3QP07 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms