Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm23251-201ENSMUST00000103773 110 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm14071-201ENSMUST00000117817 509 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm13809-201ENSMUST00000117921 597 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm11500-201ENSMUST00000118237 601 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm15595-201ENSMUST00000120840 961 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm26047-201ENSMUST00000157308 113 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm26047-202ENSMUST00000198840 115 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cpsf4lE9Q2N0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm15566-201ENSMUST00000121130 590 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm8459-201ENSMUST00000162504 760 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm10807-201ENSMUST00000177134 795 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm37466-201ENSMUST00000195692 652 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm1821-202ENSMUST00000227415 750 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cpsf4lE9Q2N0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms