Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Herc1E9PZP8 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Gm25687-201ENSMUST00000175442 241 ntBASIC6.29□□□□□ -1.4
Herc1E9PZP8 Mrip-ps-201ENSMUST00000184613 940 ntBASIC6.29□□□□□ -1.4
Herc1E9PZP8 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC6.29□□□□□ -1.4
Herc1E9PZP8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Gm10176-201ENSMUST00000159707 2264 ntBASIC6.29□□□□□ -1.4
Herc1E9PZP8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Herc1E9PZP8 Gm16219-201ENSMUST00000120096 274 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm16165-201ENSMUST00000160140 795 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm26736-201ENSMUST00000180425 1236 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm37651-201ENSMUST00000194679 1494 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm10461-201ENSMUST00000202073 4786 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm16199-201ENSMUST00000160032 288 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm29471-201ENSMUST00000190527 700 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm44721-201ENSMUST00000206978 472 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm15604-201ENSMUST00000118350 1456 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Chn2-203ENSMUST00000114401 1269 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm23368-201ENSMUST00000116939 96 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Scgb1b21-201ENSMUST00000170232 268 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm18443-201ENSMUST00000185358 556 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm29487-201ENSMUST00000190146 256 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC6.28□□□□□ -1.4
Herc1E9PZP8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Herc1E9PZP8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms