Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Gm3329-201ENSMUST00000159873 556 ntBASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Gm26119-201ENSMUST00000175601 104 ntBASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Gm5335-201ENSMUST00000182995 1000 ntBASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Gm18123-201ENSMUST00000210874 822 ntBASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 AC164087.2-201ENSMUST00000216206 1072 ntBASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 CT025603.1-201ENSMUST00000224040 448 ntBASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hfm1D3Z4R1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm43773-201ENSMUST00000198548 2162 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 CT010447.1-201ENSMUST00000225657 1608 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm26313-201ENSMUST00000157770 308 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm6612-201ENSMUST00000170777 395 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm6478-201ENSMUST00000099450 742 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm7224-201ENSMUST00000121359 2066 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Prss23os-202ENSMUST00000179361 1362 ntBASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hfm1D3Z4R1 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm11952-201ENSMUST00000121172 821 ntBASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm18733-202ENSMUST00000174447 401 ntBASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm18014-201ENSMUST00000183369 817 ntBASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gm37122-201ENSMUST00000195313 1567 ntBASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hfm1D3Z4R1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms