Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm12791-201ENSMUST00000120788 655 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm25998-201ENSMUST00000175397 53 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm43752-201ENSMUST00000198475 697 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Shank1D3YZU1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shank1D3YZU1 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.48□□□□□ -0.73
Shank1D3YZU1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.47□□□□□ -0.73
Shank1D3YZU1 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm22379-201ENSMUST00000157480 131 ntBASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm37826-201ENSMUST00000195329 322 ntBASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.47□□□□□ -0.73
Shank1D3YZU1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.47□□□□□ -0.73
Shank1D3YZU1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Shank1D3YZU1 Mir181d-201ENSMUST00000102383 72 ntBASIC10.46□□□□□ -0.73
Shank1D3YZU1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Gm4034-201ENSMUST00000187674 480 ntBASIC10.46□□□□□ -0.73
Shank1D3YZU1 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shank1D3YZU1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.46□□□□□ -0.74
Shank1D3YZU1 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms