Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm5621-201ENSMUST00000187303 640 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 CT485607.1-201ENSMUST00000216100 85 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm21811-201ENSMUST00000096485 930 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm11941-201ENSMUST00000119904 610 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm15881-201ENSMUST00000148792 942 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm27530-201ENSMUST00000184096 98 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm10774-201ENSMUST00000188689 204 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm44552-201ENSMUST00000205458 1247 ntBASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Usf3B2RUQ2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usf3B2RUQ2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usf3B2RUQ2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usf3B2RUQ2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usf3B2RUQ2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Usf3B2RUQ2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.77□□□□□ -0.84
Usf3B2RUQ2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gm42599-201ENSMUST00000201308 469 ntBASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Usf3B2RUQ2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms