Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Mir8093-201ENSMUST00000185043 137 ntBASIC11.43□□□□□ -0.58
Chd3B1AR17 Gm34023-201ENSMUST00000195539 217 ntBASIC11.43□□□□□ -0.58
Chd3B1AR17 Gm42816-201ENSMUST00000198433 325 ntBASIC11.43□□□□□ -0.58
Chd3B1AR17 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.43□□□□□ -0.58
Chd3B1AR17 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd3B1AR17 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd3B1AR17 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm23272-201ENSMUST00000104053 129 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm14942-201ENSMUST00000119642 336 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm8459-201ENSMUST00000162504 760 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm44315-201ENSMUST00000203041 219 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm30671-201ENSMUST00000214898 318 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm11451-201ENSMUST00000118946 630 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.42□□□□□ -0.58
Chd3B1AR17 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.42□□□□□ -0.58
Chd3B1AR17 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd3B1AR17 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.41□□□□□ -0.58
Chd3B1AR17 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Chd3B1AR17 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.41□□□□□ -0.58
Chd3B1AR17 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.41□□□□□ -0.58
Chd3B1AR17 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.41□□□□□ -0.58
Chd3B1AR17 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms