Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Upk3aQ9JKX8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gm9062-201ENSMUST00000117712 727 ntBASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gm7666-201ENSMUST00000146631 819 ntBASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gm44506-201ENSMUST00000206278 965 ntBASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Upk3aQ9JKX8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 B9d1os-201ENSMUST00000137010 674 ntBASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Gm18367-201ENSMUST00000176139 600 ntBASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Upk3aQ9JKX8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk3aQ9JKX8 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk3aQ9JKX8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk3aQ9JKX8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Upk3aQ9JKX8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Upk3aQ9JKX8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms