Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm11524-201ENSMUST00000119349 807 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Rmrp-201ENSMUST00000157463 271 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm7390-201ENSMUST00000212452 1216 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smco4Q9JIS3 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm26464-201ENSMUST00000157094 305 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm43474-201ENSMUST00000196415 774 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm43094-201ENSMUST00000196549 921 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm44344-201ENSMUST00000200287 129 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms