Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm4768-201ENSMUST00000206199 686 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Gm5035-201ENSMUST00000215581 927 ntBASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Ube4bQ9ES00 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.21□□□□□ -0.62
Ube4bQ9ES00 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.2□□□□□ -0.62
Ube4bQ9ES00 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm16296-201ENSMUST00000159905 325 ntBASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm4271-201ENSMUST00000174444 973 ntBASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm29649-201ENSMUST00000185649 419 ntBASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ube4bQ9ES00 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ube4bQ9ES00 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ube4bQ9ES00 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ube4bQ9ES00 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms