Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mir7051-201ENSMUST00000184167 73 ntBASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm43249-201ENSMUST00000200464 458 ntBASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm13039-201ENSMUST00000118638 794 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm16219-201ENSMUST00000120096 274 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm6606-201ENSMUST00000193613 947 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-4Q9EQM3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Map1b-203ENSMUST00000223725 2669 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm14165-201ENSMUST00000121456 952 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm11993-201ENSMUST00000121861 820 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm13981-201ENSMUST00000122360 447 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm24328-201ENSMUST00000175104 67 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm9630-201ENSMUST00000178304 885 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Mir6953-201ENSMUST00000184745 68 ntBASIC11.97□□□□□ -0.49
Nkx2-4Q9EQM3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms