Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hmgn3Q9DCB1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gm22331-201ENSMUST00000158066 136 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gm37597-201ENSMUST00000191853 382 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.95□□□□□ -0.66
Hmgn3Q9DCB1 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm13736-201ENSMUST00000119272 253 ntBASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm4271-201ENSMUST00000174444 973 ntBASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm29705-201ENSMUST00000212598 474 ntBASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Gm22058-201ENSMUST00000083393 310 ntBASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hmgn3Q9DCB1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms