Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Mir483-201ENSMUST00000093631 73 ntBASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rrp8Q9DB85 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm12030-201ENSMUST00000121917 223 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm6114-201ENSMUST00000182472 968 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm18059-201ENSMUST00000208073 580 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Gm35713-201ENSMUST00000210516 199 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rrp8Q9DB85 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rrp8Q9DB85 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm10169-201ENSMUST00000121822 348 ntBASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm9192-201ENSMUST00000183221 985 ntBASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm42816-201ENSMUST00000198433 325 ntBASIC11.45□□□□□ -0.58
Rrp8Q9DB85 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.45□□□□□ -0.58
Rrp8Q9DB85 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rrp8Q9DB85 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms