Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.35■□□□□ 0.05
U2af1Q9D883 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
U2af1Q9D883 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC15.35■□□□□ 0.05
U2af1Q9D883 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
U2af1Q9D883 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
U2af1Q9D883 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.34■□□□□ 0.05
U2af1Q9D883 Gm19459-201ENSMUST00000176240 835 ntBASIC15.34■□□□□ 0.05
U2af1Q9D883 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Gm2517-201ENSMUST00000215651 348 ntBASIC15.34■□□□□ 0.05
U2af1Q9D883 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC15.34■□□□□ 0.05
U2af1Q9D883 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
U2af1Q9D883 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.34■□□□□ 0.05
U2af1Q9D883 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
U2af1Q9D883 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15.34■□□□□ 0.05
U2af1Q9D883 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
U2af1Q9D883 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
U2af1Q9D883 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
U2af1Q9D883 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.33■□□□□ 0.05
U2af1Q9D883 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
U2af1Q9D883 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
U2af1Q9D883 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
U2af1Q9D883 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
U2af1Q9D883 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.33■□□□□ 0.04
U2af1Q9D883 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Gm13722-201ENSMUST00000117964 3066 ntBASIC15.33■□□□□ 0.04
U2af1Q9D883 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
U2af1Q9D883 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
U2af1Q9D883 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm7841-201ENSMUST00000122108 1629 ntBASIC15.32■□□□□ 0.04
U2af1Q9D883 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm23045-201ENSMUST00000175041 96 ntBASIC15.32■□□□□ 0.04
U2af1Q9D883 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.32■□□□□ 0.04
U2af1Q9D883 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
U2af1Q9D883 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms