Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Upk3bl1Q9D701 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm11233-201ENSMUST00000122357 634 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm2231-201ENSMUST00000125661 612 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm28766-201ENSMUST00000191086 234 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm37576-201ENSMUST00000194228 372 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm42693-201ENSMUST00000196779 631 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm10254-201ENSMUST00000052888 867 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Upk3bl1Q9D701 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Upk3bl1Q9D701 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Upk3bl1Q9D701 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms