Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm11478-201ENSMUST00000117851 599 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm7722-201ENSMUST00000120646 741 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm25043-201ENSMUST00000158604 212 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm24548-201ENSMUST00000158650 108 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chaf1bQ9D0N7 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm11439-201ENSMUST00000118598 409 ntBASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm12164-201ENSMUST00000121695 551 ntBASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm2546-201ENSMUST00000182630 991 ntBASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chaf1bQ9D0N7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms