Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm38241-201ENSMUST00000192641 898 ntBASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm17931-201ENSMUST00000208132 634 ntBASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trim13Q9CYB0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm15610-201ENSMUST00000120584 195 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm20614-201ENSMUST00000177106 632 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm43377-201ENSMUST00000201640 455 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Gm40466-201ENSMUST00000212174 422 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim13Q9CYB0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms