Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.95□□□□□ -0.5
Cldnd1Q9CQX5 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm14441-201ENSMUST00000121960 540 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm11942-201ENSMUST00000180255 345 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm42511-201ENSMUST00000196160 234 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gm18041-201ENSMUST00000218210 618 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cldnd1Q9CQX5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Gm25562-201ENSMUST00000104608 133 ntBASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cldnd1Q9CQX5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cldnd1Q9CQX5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms