Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm25951-201ENSMUST00000175330 64 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm27910-201ENSMUST00000185004 107 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm9136-201ENSMUST00000193368 454 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm37299-201ENSMUST00000193951 826 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Mt1-202ENSMUST00000211807 1085 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm5100-201ENSMUST00000195631 589 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm45500-201ENSMUST00000211676 803 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm19640-201ENSMUST00000214849 464 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Prpf8Q99PV0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Gm14219-201ENSMUST00000120414 288 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Gm43778-201ENSMUST00000199438 199 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 AC159376.1-201ENSMUST00000218504 630 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Prpf8Q99PV0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms