Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim11Q99PQ2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm17376-201ENSMUST00000166016 84 ntBASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm38117-201ENSMUST00000194653 939 ntBASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm8913-201ENSMUST00000209491 641 ntBASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim11Q99PQ2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm13350-201ENSMUST00000120519 479 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm7584-201ENSMUST00000175829 940 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm9797-202ENSMUST00000218003 294 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm18065-201ENSMUST00000221395 526 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Olfr582-201ENSMUST00000098212 960 ntBASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim11Q99PQ2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim11Q99PQ2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms