Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim33Q99PP7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm12036-201ENSMUST00000120008 530 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm24749-201ENSMUST00000157838 343 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm5616-201ENSMUST00000165252 384 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm8741-201ENSMUST00000174736 384 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm27627-201ENSMUST00000183644 150 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm18893-201ENSMUST00000198416 943 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm45433-201ENSMUST00000209386 247 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.71□□□□□ -0.53
Trim33Q99PP7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim33Q99PP7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm22133-201ENSMUST00000102082 109 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm11511-201ENSMUST00000118146 540 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm14603-201ENSMUST00000121275 448 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm2383-201ENSMUST00000181461 807 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm29615-201ENSMUST00000185371 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28224-201ENSMUST00000186078 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm29001-201ENSMUST00000186177 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28292-201ENSMUST00000186593 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28101-201ENSMUST00000187608 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm29076-201ENSMUST00000187689 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28302-201ENSMUST00000187931 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28646-201ENSMUST00000188220 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28205-201ENSMUST00000189177 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm29032-201ENSMUST00000189797 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm28695-201ENSMUST00000190300 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm37448-201ENSMUST00000192795 697 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms