Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm18893-201ENSMUST00000198416 943 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm43179-201ENSMUST00000198797 275 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim8Q99PJ2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.47□□□□□ -0.57
Trim8Q99PJ2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm43133-201ENSMUST00000197472 463 ntBASIC11.47□□□□□ -0.57
Trim8Q99PJ2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim8Q99PJ2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gm43002-201ENSMUST00000200310 155 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gm10254-201ENSMUST00000052888 867 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms