Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 CT010505.2-201ENSMUST00000227918 998 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm16219-201ENSMUST00000120096 274 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm6238-201ENSMUST00000120999 465 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm3945-201ENSMUST00000196637 683 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh23Q99PF4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Gm38145-201ENSMUST00000192319 693 ntBASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.52□□□□□ -0.56
Cdh23Q99PF4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdh23Q99PF4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms