Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Gm20495-201ENSMUST00000173902 235 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 Gm2594-201ENSMUST00000214774 742 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.41□□□□□ -0.1
RtcbQ99LF4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.41□□□□□ -0.1
RtcbQ99LF4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gm34379-201ENSMUST00000195036 290 ntBASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.4□□□□□ -0.1
RtcbQ99LF4 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RtcbQ99LF4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RtcbQ99LF4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm15528-201ENSMUST00000117821 864 ntBASIC14.39□□□□□ -0.11
RtcbQ99LF4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.39□□□□□ -0.11
RtcbQ99LF4 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm45085-201ENSMUST00000209100 441 ntBASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm7525-201ENSMUST00000219425 454 ntBASIC14.39□□□□□ -0.11
RtcbQ99LF4 AC142266.1-201ENSMUST00000228107 415 ntBASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.39□□□□□ -0.11
RtcbQ99LF4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms