Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhb3Q91XZ7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm5605-201ENSMUST00000208940 1305 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Mir1247-201ENSMUST00000116706 82 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm45880-201ENSMUST00000213041 853 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Gm17611-202ENSMUST00000220613 814 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pcdhb3Q91XZ7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pcdhb3Q91XZ7 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm12656-201ENSMUST00000118149 577 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm7029-201ENSMUST00000173226 450 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm36966-201ENSMUST00000192217 413 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Gm38002-201ENSMUST00000193255 180 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 AC126043.1-201ENSMUST00000221304 1141 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 AC174797.4-201ENSMUST00000225510 347 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 AC096628.1-201ENSMUST00000226060 641 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdhb3Q91XZ7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms