Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Gm45856-201ENSMUST00000212752 416 ntBASIC11.91□□□□□ -0.5
Lims2Q91XD2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Lims2Q91XD2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.91□□□□□ -0.5
Lims2Q91XD2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.91□□□□□ -0.5
Lims2Q91XD2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lims2Q91XD2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm12029-201ENSMUST00000120073 832 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm11246-201ENSMUST00000120880 345 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm14460-201ENSMUST00000121511 639 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm19459-201ENSMUST00000176240 835 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm29067-201ENSMUST00000190821 470 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm6722-201ENSMUST00000221586 390 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Gm23105-201ENSMUST00000083719 134 ntBASIC11.9□□□□□ -0.5
Lims2Q91XD2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lims2Q91XD2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lims2Q91XD2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.89□□□□□ -0.51
Lims2Q91XD2 Btrc-209ENSMUST00000224478 2194 ntBASIC11.89□□□□□ -0.51
Lims2Q91XD2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.89□□□□□ -0.51
Lims2Q91XD2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.89□□□□□ -0.51
Lims2Q91XD2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.89□□□□□ -0.51
Lims2Q91XD2 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lims2Q91XD2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms