Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Spcs1-203ENSMUST00000226374 592 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Gm45210-201ENSMUST00000206401 1577 ntBASIC12.22□□□□□ -0.45
Usp3Q91W36 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Usp3Q91W36 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Usp3Q91W36 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 AC151904.4-201ENSMUST00000219868 1319 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Usp3Q91W36 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm6047-201ENSMUST00000167221 574 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm8815-201ENSMUST00000173809 620 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm8902-201ENSMUST00000174341 1096 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm43378-201ENSMUST00000199336 582 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm6450-201ENSMUST00000200896 574 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Gm9555-201ENSMUST00000200908 583 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.21□□□□□ -0.45
Usp3Q91W36 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Usp3Q91W36 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Usp3Q91W36 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Usp3Q91W36 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp3Q91W36 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp3Q91W36 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Usp3Q91W36 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp3Q91W36 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Usp3Q91W36 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.21□□□□□ -0.46
Usp3Q91W36 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Usp3Q91W36 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.21□□□□□ -0.46
Usp3Q91W36 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Usp3Q91W36 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm12165-201ENSMUST00000117047 342 ntBASIC12.2□□□□□ -0.46
Usp3Q91W36 Gm11510-201ENSMUST00000120278 347 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms