Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm7488-201ENSMUST00000117148 684 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm12058-201ENSMUST00000118614 437 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.05□□□□□ -0.8
Tram1Q91V04 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm6439-201ENSMUST00000199849 862 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.05□□□□□ -0.8
Tram1Q91V04 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.05□□□□□ -0.8
Tram1Q91V04 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Tram1Q91V04 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm24644-201ENSMUST00000157114 139 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Lect2-202ENSMUST00000225183 823 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm5356-201ENSMUST00000093326 615 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Tram1Q91V04 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.04□□□□□ -0.8
Tram1Q91V04 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Tram1Q91V04 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms