Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp7Q8R1T1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Gm13422-201ENSMUST00000118834 504 ntBASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Gm25951-201ENSMUST00000175330 64 ntBASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp7Q8R1T1 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm4294-201ENSMUST00000105169 614 ntBASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm13600-201ENSMUST00000117949 744 ntBASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm12274-201ENSMUST00000120062 385 ntBASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Gm18059-201ENSMUST00000208073 580 ntBASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp7Q8R1T1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Gm14270-201ENSMUST00000118388 846 ntBASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Gm11700-201ENSMUST00000119409 403 ntBASIC14.9□□□□□ -0.02
Chmp7Q8R1T1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms