Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm6024-201ENSMUST00000117850 1558 ntBASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm8768-201ENSMUST00000220020 826 ntBASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 AC129975.1-201ENSMUST00000224816 592 ntBASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Gm44106-201ENSMUST00000203153 1599 ntBASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx54Q8K4L0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gm8019-201ENSMUST00000119317 587 ntBASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gm42751-201ENSMUST00000198065 559 ntBASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 AC121567.1-201ENSMUST00000227213 842 ntBASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx54Q8K4L0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Gm12736-201ENSMUST00000119330 236 ntBASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms