Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clrn1Q8K445 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clrn1Q8K445 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clrn1Q8K445 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.03□□□□□ -0.64
Clrn1Q8K445 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.03□□□□□ -0.64
Clrn1Q8K445 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Clrn1Q8K445 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.03□□□□□ -0.64
Clrn1Q8K445 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clrn1Q8K445 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.03□□□□□ -0.64
Clrn1Q8K445 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clrn1Q8K445 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm11663-201ENSMUST00000117888 290 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm15207-201ENSMUST00000119259 442 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm12997-201ENSMUST00000120207 640 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm12266-201ENSMUST00000120311 962 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm12196-201ENSMUST00000120954 262 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm28937-201ENSMUST00000185413 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm29400-201ENSMUST00000187208 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm28662-201ENSMUST00000188446 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm28251-201ENSMUST00000188835 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm37318-201ENSMUST00000194325 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm38017-201ENSMUST00000194768 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm37287-201ENSMUST00000195449 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm37793-201ENSMUST00000195548 695 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm6450-201ENSMUST00000200896 574 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clrn1Q8K445 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.02□□□□□ -0.65
Clrn1Q8K445 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 Gm29199-201ENSMUST00000187766 775 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.01□□□□□ -0.65
Clrn1Q8K445 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.01□□□□□ -0.65
Clrn1Q8K445 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms