Protein–RNA interactions for Protein: Q8K136

Scnm1, Sodium channel modifier 1, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnm1Q8K136 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Gm23105-201ENSMUST00000083719 134 ntBASIC10.17□□□□□ -0.78
Scnm1Q8K136 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Scnm1Q8K136 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Pck2-205ENSMUST00000226352 2784 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm11619-201ENSMUST00000117474 237 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm14213-201ENSMUST00000119778 768 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm5700-201ENSMUST00000191483 989 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm7082-201ENSMUST00000209880 969 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.16□□□□□ -0.78
Scnm1Q8K136 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scnm1Q8K136 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.15□□□□□ -0.78
Scnm1Q8K136 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scnm1Q8K136 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms