Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rfwd3Q8CIK8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm4909-201ENSMUST00000118749 794 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm14441-201ENSMUST00000121960 540 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm16505-201ENSMUST00000179981 232 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm27552-201ENSMUST00000183351 62 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm27844-201ENSMUST00000183613 62 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm28450-201ENSMUST00000187349 638 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm2553-201ENSMUST00000215986 605 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm9797-202ENSMUST00000218003 294 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm807-202ENSMUST00000224929 408 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rfwd3Q8CIK8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gm12857-201ENSMUST00000117678 592 ntBASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gm6114-201ENSMUST00000182472 968 ntBASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gm9192-201ENSMUST00000183221 985 ntBASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 AU022133-201ENSMUST00000200601 873 ntBASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfwd3Q8CIK8 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms