Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smc5Q8CG46 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smc5Q8CG46 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc5Q8CG46 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smc5Q8CG46 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gm13392-201ENSMUST00000117708 150 ntBASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gm12241-201ENSMUST00000118330 726 ntBASIC14.4□□□□□ -0.1
Smc5Q8CG46 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gm43433-201ENSMUST00000196573 481 ntBASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.4□□□□□ -0.1
Smc5Q8CG46 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smc5Q8CG46 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.39□□□□□ -0.11
Smc5Q8CG46 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm8343-201ENSMUST00000182705 994 ntBASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 AY702102-202ENSMUST00000194651 1173 ntBASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm45224-201ENSMUST00000208203 414 ntBASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm7940-201ENSMUST00000218195 769 ntBASIC14.39□□□□□ -0.11
Smc5Q8CG46 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smc5Q8CG46 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gm5616-201ENSMUST00000165252 384 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gm8741-201ENSMUST00000174736 384 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Mir7085-201ENSMUST00000184353 66 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 Mir8109-201ENSMUST00000184375 117 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms