Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm37246-201ENSMUST00000192665 835 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm43002-201ENSMUST00000200310 155 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm19208-201ENSMUST00000213861 912 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brf1Q8CFK2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Brf1Q8CFK2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Brf1Q8CFK2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brf1Q8CFK2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brf1Q8CFK2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Brf1Q8CFK2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm13916-201ENSMUST00000117368 628 ntBASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm13263-201ENSMUST00000121271 838 ntBASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm18065-201ENSMUST00000221395 526 ntBASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brf1Q8CFK2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ntng1-201ENSMUST00000051253 327 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Brf1Q8CFK2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms