Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm18038-201ENSMUST00000197900 485 ntBASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Gm45118-201ENSMUST00000208928 825 ntBASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.81□□□□□ -0.2
Nup88Q8CEC0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Gm22133-201ENSMUST00000102082 109 ntBASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Gm13045-201ENSMUST00000119019 712 ntBASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.8□□□□□ -0.2
Nup88Q8CEC0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Gm270-201ENSMUST00000223010 976 ntBASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup88Q8CEC0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm15515-201ENSMUST00000117827 822 ntBASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm9555-201ENSMUST00000200908 583 ntBASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm43962-201ENSMUST00000203898 190 ntBASIC13.79□□□□□ -0.2
Nup88Q8CEC0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm5369-201ENSMUST00000217499 588 ntBASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nup88Q8CEC0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms