Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm19994-201ENSMUST00000217086 586 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm8712-201ENSMUST00000221090 701 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Gm10312-201ENSMUST00000078515 489 ntBASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc87Q8CDL9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc87Q8CDL9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc87Q8CDL9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc87Q8CDL9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc87Q8CDL9 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc87Q8CDL9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm14109-201ENSMUST00000118814 309 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm14832-201ENSMUST00000121289 322 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm38314-201ENSMUST00000195709 625 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm13097-201ENSMUST00000210722 397 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm10254-201ENSMUST00000052888 867 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc87Q8CDL9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc87Q8CDL9 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms