Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Gm5706-201ENSMUST00000181525 993 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Gm2546-201ENSMUST00000182630 991 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Lect2-202ENSMUST00000225183 823 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lrif1Q8CDD9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Erich3-203ENSMUST00000189969 3460 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm27023-201ENSMUST00000182372 285 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lrif1Q8CDD9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm15236-201ENSMUST00000117309 379 ntBASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm13736-201ENSMUST00000119272 253 ntBASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.54□□□□□ -0.56
Lrif1Q8CDD9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms