Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm12501-201ENSMUST00000119163 529 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 AU022133-201ENSMUST00000200601 873 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm4482-201ENSMUST00000200876 742 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm43966-201ENSMUST00000203301 612 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim9Q8C7M3 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm24990-201ENSMUST00000157406 323 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm5733-201ENSMUST00000190232 939 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim9Q8C7M3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trim9Q8C7M3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms