Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.96□□□□□ -0.66
Vps9d1Q8C190 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm11700-201ENSMUST00000119409 403 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm12164-201ENSMUST00000121695 551 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm6082-201ENSMUST00000215204 454 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps9d1Q8C190 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm5419-201ENSMUST00000119301 527 ntBASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm8420-201ENSMUST00000097103 598 ntBASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps9d1Q8C190 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vps9d1Q8C190 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.93□□□□□ -0.66
Vps9d1Q8C190 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vps9d1Q8C190 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Vps9d1Q8C190 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vps9d1Q8C190 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms